Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs79911170 chr21:44239310 C/T 0.000169 288 25.53 43.53 13.07 KM Plot
KIRP rs79924446 chr5:156471856 A/AG 8.99E-8 287 12.78 22.47 26.37 KM Plot
KIRP rs79954596 chr19:19548643 T/G 4.97E-5 288 25.02 27.1 8.98 KM Plot
KIRP rs79975632 chr16:90091087 T/A 1.78E-7 286 24.67 34.63 10.7 KM Plot
KIRP rs80003458 chr16:89528866 G/C 0.000121 283 25.53 26.6 19.9 KM Plot
KIRP rs80032725 chr16:90065555 AGCCACCTACTCCT/A 0.000174 286 25.15 35.32 10.47 KM Plot
KIRP rs80052783 chr21:44304231 G/A 0.000151 289 25.58 40.7 13.07 KM Plot
KIRP rs80058464 chr11:20963918 G/A 1.29E-5 289 25.57 30.8 19.58 KM Plot
KIRP rs80066296 chr10:43151738 T/A 6.46E-5 288 25.57 27.75 11.43 KM Plot
KIRP rs80071235 chr12:2354582 T/A 0 283 26.38 19.28 4.63 KM Plot
KIRP rs80134030 chr16:354943 G/A 2.35E-8 282 25.7 26.77 12.3 KM Plot
KIRP rs80179272 chr4:175662234 A/G 3.57E-7 284 26 20.08 1.2 KM Plot
KIRP rs80180964 chr19:16546467 CG/C 9.78E-9 289 26 21.97 11.37 KM Plot
KIRP rs80195056 chr10:124809829 G/A 0.000119 287 25.4 28.17 18.33 KM Plot
KIRP rs80220635 chr16:90026049 C/G 1.97E-8 282 24.73 34.82 5.95 KM Plot